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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003560.1_430_836_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

430 - 836

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCAGGGGG

5'SS Class:

major

3'SS Sequence:

TTGCTGCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

TGGGGCTGACCC

Flanking Amino Acid:

AGMALPHSAHRALPGGGSDR

Intron Amino Acid Position:

581

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.3

59.5

42.5

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

71.8

0.49

0.9

65.1

36.4

Minor 5ss

-3

3.2

29.6

43.2

Minor BPS

42.2

-0.6

2.1

51.46

45.5

Associated Gene:

Gene:

GPAA1

Ensembl Gene ID:

ENSAPLG00000023434

Chromosome:

PEDO01003560.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018465

21 - 3566

3546