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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003561.1_1614_3607_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1614 - 3607

Intron Length:

1994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTGGGTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TCTGAACTAATC

Flanking Amino Acid:

NKLALQYGCQVADIKRVNNF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

77.9

0.69

0.8

75.9

Major PPT

69.2

0.43

61.9

44.4

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

43.8

-0.4

2.1

57.05

41.6

Associated Gene:

Gene:

LYSMD4

Ensembl Gene ID:

ENSAPLG00000025997

Chromosome:

PEDO01003561.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034717

21 - 3823

3803