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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003577.1_2957_3277_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2957 - 3277

Intron Length:

321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TAAGTTACAAAT

Flanking Amino Acid:

KDILEKKVEKVVVSNRLVTS

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

83.7

34.8

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

0.74

0.8

77.1

37.1

Minor 5ss

37.5

-1.4

2.8

52.1

44.3

Minor BPS

41.7

-0.5

1.8

56.17

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026143

Chromosome:

PEDO01003577.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025933

383 - 4489

4107

ENSAPLT00000020743

383 - 6166

5784