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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003579.1_227_960_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

227 - 960

Intron Length:

734

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAT|GCTGTTATT

5'SS Class:

weak_major

3'SS Sequence:

AACCATGGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTCTAT

U12 Branch Point Sequence:

TCTTCCAGAAAC

Flanking Amino Acid:

FWFVYWFSQDVSVTQEEGQV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.8

0.02

1.5

68.9

41.8

Major BPS

61.2

0.28

1.4

60.7

45.4

Major PPT

49.2

-0

1.2

42.4

Minor 5ss

28.8

-2.4

Minor BPS

54.6

0.12

1.9

69.94

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017799

Chromosome:

PEDO01003579.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042911

137 - 1395

1259