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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003601.1_1108_2104_R

Intron Information:

Intron Rank:

133932

Intron Class:

major

Intron Phase:

Intron Coordinates:

1108 - 2104

Intron Length:

997

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTTGTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TGTTTATTATGG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

71.6

40.2

Major BPS

84.7

0.86

74.3

40.7

Major PPT

82.8

0.74

0.9

83.9

31.1

Minor 5ss

33.1

-1.9

3.1

41.9

44.7

Minor BPS

-0.4

2.1

56.71

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019327

Chromosome:

PEDO01003601.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040792

311 - 2484

2174