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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003602.1_846_3644_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

846 - 3644

Intron Length:

2799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CCCCGTGGGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCCAAC

U12 Branch Point Sequence:

GGTGCCCCAACT

Flanking Amino Acid:

KEAIVELEVSAPGPELGKAC

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

1.1

71.7

38.6

Major BPS

44.9

-0.3

1.2

Major PPT

52.7

0.06

1.1

48.1

39.3

Minor 5ss

29.4

-2.4

2.9

40.7

Minor BPS

49.4

0.03

71.07

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021938

Chromosome:

PEDO01003602.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025202

345 - 4342

3998