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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003655.1_2154_2280_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2154 - 2280

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

CTGTCCTAAATG

Flanking Amino Acid:

FKQEGIMNCKVGMDYRNCIL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

69.9

41.1

Major BPS

72.7

0.57

72.1

31.1

Major PPT

86.2

0.81

0.7

80.7

24.5

Minor 5ss

29.8

-2.3

3.3

38.5

46.6

Minor BPS

0.18

1.8

62.53

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020473

Chromosome:

PEDO01003655.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027777

1849 - 2439

591