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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003666.1_3596_4022_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3596 - 4022

Intron Length:

427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCCCCCC

5'SS Class:

weak_major

3'SS Sequence:

CGGCTTTGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAC

U12 Branch Point Sequence:

GCGTGCCCACGG

Flanking Amino Acid:

TWPATRSSSPRVNVGCGPAE

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.5

0.22

1.2

47.8

Major BPS

48.9

-0

1.3

58.1

40.4

Major PPT

65.5

0.35

60.4

40.3

Minor 5ss

38.2

-1.3

3.2

51.8

44.9

Minor BPS

29.8

-1.6

2.2

28.29

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021637

Chromosome:

PEDO01003666.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032196

2773 - 5662

2890