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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003666.1_866_1731_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

866 - 1731

Intron Length:

866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

GTCTGCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCAAA

U12 Branch Point Sequence:

TGCCCCCAAAGC

Flanking Amino Acid:

PGTNIKLYNKITSRLADVFN

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

65.8

40.2

Major BPS

45.1

-0.3

1.2

48.3

32.9

Major PPT

69.2

0.43

0.9

34.8

Minor 5ss

33.7

-1.9

42.6

44.4

Minor BPS

42.6

-0.5

2.2

53.33

44.1

Associated Gene:

Gene:

CLP1

Ensembl Gene ID:

ENSAPLG00000020334

Chromosome:

PEDO01003666.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029334

21 - 2350

2330