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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003689.1_5014_5545_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5014 - 5545

Intron Length:

532

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAAC

5'SS Class:

strong_major

3'SS Sequence:

GCCCTTCTCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

AGCCCCTCACCC

Flanking Amino Acid:

KRRKTEQEAKESLGETGPLP

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

75.1

35.1

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

74.9

0.56

0.8

72.1

32.5

Minor 5ss

32.4

-2

3.2

42.3

44.8

Minor BPS

47.4

-0.2

1.8

55.51

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021056

Chromosome:

PEDO01003689.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031875

4434 - 5868

1435