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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003745.1_346_427_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

346 - 427

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCGCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAG

U12 Branch Point Sequence:

GGTGCCGCAGCT

Flanking Amino Acid:

RADESPYRFQTPYFWTSTKW

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

75.5

35.8

Major BPS

48.8

-0

1.5

57.1

41.8

Major PPT

67.5

0.39

0.9

57.8

38.5

Minor 5ss

32.9

-2

3.3

44.7

43.3

Minor BPS

41.9

-0.5

2.4

61.89

47.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026578

Chromosome:

PEDO01003745.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020886

21 - 1380

1360