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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003745.1_480_564_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

480 - 564

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTGCC

5'SS Class:

major

3'SS Sequence:

ACTCCCTTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

GGTGGCTGCACT

Flanking Amino Acid:

TKWPATELDYAIYLAKKNIR

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

69.5

36.3

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

75.1

0.57

0.8

30.7

Minor 5ss

32.7

-2

3.4

40.9

40.8

Minor BPS

-0.4

2.3

62.22

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026578

Chromosome:

PEDO01003745.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020886

21 - 1380

1360