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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003745.1_893_1016_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

893 - 1016

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTGCCATGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAT

U12 Branch Point Sequence:

TTGCCATGGACA

Flanking Amino Acid:

FVVMQAREQLRAAKQRRKGD

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

71.5

33.9

Major BPS

62.2

0.3

1.4

72.5

43.5

Major PPT

61.5

0.26

1.1

57.4

42.4

Minor 5ss

-2.5

33.3

41.7

Minor BPS

-0

1.8

66.29

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026578

Chromosome:

PEDO01003745.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020886

21 - 1380

1360