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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003751.1_2108_2203_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2108 - 2203

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTGCAT

U12 Branch Point Sequence:

TGGCCCTGAGCT

Flanking Amino Acid:

PLHQELPFGVPYPHVMPRRL

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

77.1

37.8

Major BPS

47.9

-0.1

1.6

59.3

47.1

Major PPT

81.7

0.71

0.7

31.1

Minor 5ss

-1.5

48.7

41.1

Minor BPS

0.2

1.8

71.77

44.3

Associated Gene:

Gene:

RNF44

Ensembl Gene ID:

ENSAPLG00000022852

Chromosome:

PEDO01003751.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044790

21 - 3615

3595

ENSAPLT00000040129

21 - 3615

3595

ENSAPLT00000021582

21 - 3615

3595