Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003751.1_2933_3019_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2933 - 3019

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTGCC

5'SS Class:

major

3'SS Sequence:

CTTGCCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CCCTGCTCACCC

Flanking Amino Acid:

HAKCVDKWLKANRTCPICRA

Intron Amino Acid Position:

423

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.2

66.4

40.8

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

75.7

0.58

0.8

69.2

31.3

Minor 5ss

38.4

-1.3

3.3

53.8

43.4

Minor BPS

42.8

-0.5

2.2

49.59

47.1

Associated Gene:

Gene:

RNF44

Ensembl Gene ID:

ENSAPLG00000022852

Chromosome:

PEDO01003751.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021582

21 - 3615

3595