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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003751.1_927_1280_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

927 - 1280

Intron Length:

354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTCGTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

TGCCCTCTGACT

Flanking Amino Acid:

NPFMVDLHDQVHQGPVPLSY

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

69.1

0.47

60.7

37.6

Major PPT

70.6

0.46

0.8

61.2

35.1

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

52.2

0.15

1.7

70.26

40.6

Associated Gene:

Gene:

RNF44

Ensembl Gene ID:

ENSAPLG00000022852

Chromosome:

PEDO01003751.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044790

21 - 3615

3595

ENSAPLT00000040129

21 - 3615

3595

ENSAPLT00000021582

21 - 3615

3595