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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003766.1_805_1028_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

805 - 1028

Intron Length:

224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCCTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTCCAT

U12 Branch Point Sequence:

ACTGCCTCCATT

Flanking Amino Acid:

ATDISPRKPKKYELRVIVWN

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

77.7

Major BPS

52.4

0.06

1.3

41.7

Major PPT

71.5

0.48

0.9

64.9

36.4

Minor 5ss

33.3

-1.9

3.2

39.8

40.3

Minor BPS

47.5

-0.1

2.1

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027309

Chromosome:

PEDO01003766.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019145

261 - 1984

1724