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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003768.1_3560_6530_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3560 - 6530

Intron Length:

2971

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCAAAACGT

5'SS Class:

major

3'SS Sequence:

GGTGGTGTACCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGCAG

U12 Branch Point Sequence:

TTTGCCGACACG

Flanking Amino Acid:

PSECLFNSCWAIHTIEYCLG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.7

0.39

1.3

59.6

44.2

Major BPS

51.1

0.03

1.8

71.4

45.1

Major PPT

57.3

0.16

1.1

47.3

48.9

Minor 5ss

22.3

-3.2

3.9

30.5

42.7

Minor BPS

42.1

-0.7

2.7

58.33

49.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026349

Chromosome:

PEDO01003768.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039759

3488 - 13525

10038