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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003768.1_7242_13431_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7242 - 13431

Intron Length:

6190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GCCCTTCTAATG

Flanking Amino Acid:

SAFLHALRLHWIEFQNKFYT

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.2

28.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

86.6

0.82

0.8

81.1

30.9

Minor 5ss

35.2

-1.7

2.8

40.3

40.2

Minor BPS

44.1

-0.5

1.6

41.06

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026349

Chromosome:

PEDO01003768.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039759

3488 - 13525

10038