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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003786.1_605_934_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

605 - 934

Intron Length:

330

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCG|GCGCAGTGC

5'SS Class:

weak_major

3'SS Sequence:

CGGGGCCCCGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACGGAC

U12 Branch Point Sequence:

AGGCCACGGACC

Flanking Amino Acid:

RVTAVDHGVPRATATVRIVV

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.9

0.02

1.3

44.4

40.3

Major BPS

44.6

-0.3

1.2

38.4

32.3

Major PPT

55.9

0.13

46.7

36.7

Minor 5ss

20.1

-3.5

4.1

43.5

Minor BPS

39.3

-0.8

1.9

45.63

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026192

Chromosome:

PEDO01003786.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018196

245 - 3279

3035