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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003803.1_1213_1835_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1213 - 1835

Intron Length:

623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAATCGG

5'SS Class:

major

3'SS Sequence:

TTTTTTCCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

CTGTTTTTGACT

Flanking Amino Acid:

TDVCCRISDKYLLAMALTYF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.3

56.9

47.7

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

88.1

0.86

0.6

81.6

30.5

Minor 5ss

28.4

-2.5

2.7

33.3

41.6

Minor BPS

68.2

0.66

1.2

77.64

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020539

Chromosome:

PEDO01003803.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035285

21 - 3079

3059