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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003837.1_294_633_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

294 - 633

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCCAGAGCA

5'SS Class:

major

3'SS Sequence:

TGGGAGCATGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTGAG

U12 Branch Point Sequence:

GGAAGCTGAGTG

Flanking Amino Acid:

LLHQHSGAPLEHHFGETQPG

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.2

37.1

Major BPS

47.4

-0.1

1.5

42.8

41.8

Major PPT

56.5

0.15

1.1

47.5

44.9

Minor 5ss

15.9

-3.9

3.5

19.4

29.7

Minor BPS

-1

1.9

35.87

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013765

Chromosome:

PEDO01003837.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014331

7 - 4021

4015