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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003837.1_4883_4968_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4883 - 4968

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

TCCCCTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGCAC

U12 Branch Point Sequence:

TCCCTGTGCACG

Flanking Amino Acid:

LEANAIYTYCGIILVAINPY

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

57.1

42.2

Major BPS

-0

1.5

63.1

44.5

Major PPT

80.5

0.69

0.7

72.4

32.3

Minor 5ss

34.2

-1.8

44.2

43.2

Minor BPS

36.9

-1.1

2.3

40.4

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019763

Chromosome:

PEDO01003837.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018382

4527 - 6418

1892