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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003837.1_5132_5353_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5132 - 5353

Intron Length:

222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGGCTG

5'SS Class:

major

3'SS Sequence:

CCCGTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

CGGCTCTCATCC

Flanking Amino Acid:

VLHLRLEDGSTLVYPLESQL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

60.8

45.3

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

0.4

0.8

29.2

Minor 5ss

29.4

-2.4

3.4

39.3

Minor BPS

44.2

-0.4

1.8

48.27

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019763

Chromosome:

PEDO01003837.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018382

4527 - 6418

1892