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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003861.1_720_980_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

720 - 980

Intron Length:

261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

TAACTTGCTGCAG|C

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TCCTTAA

U12 Branch Point Sequence:

GTCTCCTTAACT

Flanking Amino Acid:

LCIAYWASTAVFLSTSNEAV

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

49.6

-0

1.3

55.3

44.3

Major BPS

69.7

0.49

59.9

38.5

Major PPT

72.4

0.5

40.3

Minor 5ss

96.7

1.57

0.7

90.9

28.7

Minor BPS

87.2

1.25

92.9

35.6

Associated Gene:

Gene:

SLC44A2

Ensembl Gene ID:

ENSAPLG00000009225

Chromosome:

PEDO01003861.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009669

1 - 3774

3774