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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003873.1_3513_3815_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3513 - 3815

Intron Length:

303

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAAGAAC

5'SS Class:

major

3'SS Sequence:

CCAGCTGGTGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

GCACCTTCCAGC

Flanking Amino Acid:

LEVRRGAAVRLRVLSNWGHP

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.8

0.28

1.1

60.1

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

45.2

-0.2

1.7

45.2

41.1

Minor 5ss

33.2

-1.9

3.3

38.9

40.8

Minor BPS

38.6

-0.9

41.25

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019982

Chromosome:

PEDO01003873.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017256

3432 - 5395

1964