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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003873.1_4241_4362_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4241 - 4362

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

CCCGCCCGCGTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GATACCTAAAGG

Flanking Amino Acid:

QSQSPRVILQPDVNPGNCWA

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

55.5

0.12

0.9

49.4

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

47.8

-0.3

2.1

54.16

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019982

Chromosome:

PEDO01003873.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017256

3432 - 5395

1964