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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003914.1_1107_1187_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1107 - 1187

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCCG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTCT

U12 Branch Point Sequence:

TTCTCCTTCCTC

Flanking Amino Acid:

LKALAQVVEKAERVLRLAEM

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

63.1

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

81.5

0.71

0.7

76.6

25.4

Minor 5ss

25.6

-2.8

30.2

Minor BPS

44.1

-0.4

3.6

69.44

42.9

Associated Gene:

Gene:

CCDC65

Ensembl Gene ID:

ENSAPLG00000003175

Chromosome:

PEDO01003914.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003216

592 - 2555

1964