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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003914.1_1407_1501_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1407 - 1501

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGTGCCA

5'SS Class:

major

3'SS Sequence:

CCTCTGCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TCCTGCTCACGG

Flanking Amino Acid:

MQAKKLQKLQDLVAATKARL

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.1

52.1

40.5

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

70.9

0.47

0.8

61.9

34.9

Minor 5ss

24.3

-3

3.2

30.6

42.8

Minor BPS

38.7

-1

2.3

42.41

48.7

Associated Gene:

Gene:

CCDC65

Ensembl Gene ID:

ENSAPLG00000003175

Chromosome:

PEDO01003914.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003216

592 - 2555

1964