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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003914.1_1700_1828_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1700 - 1828

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCACGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAA

U12 Branch Point Sequence:

CTGAAGGGAACC

Flanking Amino Acid:

QSARDDIKSKSLQEKQYSRL

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.83

67.4

40.3

Major BPS

58.2

0.2

1.1

49.1

Major PPT

0.61

0.8

68.8

37.2

Minor 5ss

18.4

-3.6

3.9

29.7

43.1

Minor BPS

34.1

-1.2

2.5

44.55

43.3

Associated Gene:

Gene:

CCDC65

Ensembl Gene ID:

ENSAPLG00000003175

Chromosome:

PEDO01003914.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003216

592 - 2555

1964