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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003914.1_844_953_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

844 - 953

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

GCCTCTCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTCCAG

U12 Branch Point Sequence:

CTGCCCTTCTCT

Flanking Amino Acid:

KEEPAEPLAQALQDYVGLER

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

39.4

-0.6

1.6

46.1

46.9

Major PPT

73.5

0.53

0.8

64.6

36.5

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

41.3

-0.5

3.6

68.94

47.7

Associated Gene:

Gene:

CCDC65

Ensembl Gene ID:

ENSAPLG00000003175

Chromosome:

PEDO01003914.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003216

592 - 2555

1964