Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003919.1_1377_1487_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1377 - 1487

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGATG

5'SS Class:

major

3'SS Sequence:

GCCCCTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

GCCCTGGTGACA

Flanking Amino Acid:

LKYYLEKDWAGSRRHGHPLT

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

69.5

42.7

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

69.6

0.44

0.8

60.6

35.2

Minor 5ss

-2.4

3.4

38.2

Minor BPS

37.3

-1

2.4

43.25

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030720

Chromosome:

PEDO01003919.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037381

21 - 2055

2035