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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003927.1_2054_2225_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2054 - 2225

Intron Length:

172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCACAA

U12 Branch Point Sequence:

AGCTCCTGAGCT

Flanking Amino Acid:

KKEKGYYVAPGSDGGSSCST

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

80.9

25.7

Major BPS

56.2

0.15

64.6

32.2

Major PPT

85.3

0.79

0.7

80.1

25.2

Minor 5ss

27.5

-2.6

33.8

42.3

Minor BPS

0.3

1.8

72.49

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022164

Chromosome:

PEDO01003927.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038654

21 - 2666

2646