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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003939.1_12371_13103_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12371 - 13103

Intron Length:

733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAATG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

TTTCTGTGAAAT

Flanking Amino Acid:

VRTVTLSSKKGDEPVVRPDL

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

77.4

37.4

Major BPS

0.1

59.7

32.6

Major PPT

81.4

0.71

0.8

80.3

31.8

Minor 5ss

37.2

-1.5

49.1

46.7

Minor BPS

48.4

-0

2.2

75.47

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020718

Chromosome:

PEDO01003939.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031076

8857 - 13183

4327