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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003940.1_417_872_F

Intron Information:

Intron Rank:

142149

Intron Class:

major

Intron Phase:

Intron Coordinates:

417 - 872

Intron Length:

456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCAGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTCAT

U12 Branch Point Sequence:

CTCTCCAGGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.99

0.8

81.6

33.2

Major BPS

68.2

0.45

1.1

69.4

37.7

Major PPT

61.5

0.26

1.1

57.3

37.4

Minor 5ss

41.6

-0.9

3.1

55.7

48.5

Minor BPS

49.9

-0

1.8

64.17

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026539

Chromosome:

PEDO01003940.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039478

21 - 1039

1019