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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003951.1_30835_31704_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
30835 - 31704

Intron Length:
870

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAT|GTGAGTTAT

5'SS Class:
strong_major

3'SS Sequence:
CCTCTCCCCGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTTT

U12 Branch Point Sequence:
TTTCCCTTTTTT

Flanking Amino Acid:
GSKPEPQDSKSQNLTTCEVC

Intron Amino Acid Position:
48

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.8
0.75
1
82.1
25.6

Major BPS
38.1
-0.7
4.3
71.7
44.6

Major PPT
75
0.56
0.7
69
24.7

Minor 5ss
38.8
-1.3
3
53.7
43.8

Minor BPS
45.4
-0.2
3.6
81.55
40.1

Associated Gene:

Gene:
WIZ

Ensembl Gene ID:

Chromosome:
PEDO01003951.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

30693 - 36586
5894