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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003951.1_40420_41136_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40420 - 41136

Intron Length:

717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTGCG

5'SS Class:

strong_major

3'SS Sequence:

GGTTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

ATAACCAGAAAT

Flanking Amino Acid:

YGEWNSGTNRGYEGYSYGYG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

1.1

69.7

41.3

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

82.5

0.73

0.9

73.5

41.8

Minor 5ss

38.5

-1.3

3.1

50.4

Minor BPS

47.9

-0

1.8

68.32

41.1

Associated Gene:

Gene:

AKAP8L

Ensembl Gene ID:

ENSAPLG00000013599

Chromosome:

PEDO01003951.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014181

38789 - 48527

9739