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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004030.1_1589_4156_R

Intron Information:

Intron Rank:

142186

Intron Class:

major

Intron Phase:

Intron Coordinates:

1589 - 4156

Intron Length:

2568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAC

U12 Branch Point Sequence:

TTGGTAGTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

74.8

38.1

Major BPS

66.7

0.42

1.2

67.6

36.5

Major PPT

80.9

0.7

0.8

73.5

37.1

Minor 5ss

37.9

-1.4

2.9

40.9

45.3

Minor BPS

46.1

-0.3

2.3

62.46

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023834

Chromosome:

PEDO01004030.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045996

1009 - 8699

7691