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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004030.1_4201_7645_R

Intron Information:

Intron Rank:

142187

Intron Class:

major

Intron Phase:

Intron Coordinates:

4201 - 7645

Intron Length:

3445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

CTGGGTCTAACG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

85.8

25.2

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

90.3

0.91

0.6

84.6

30.3

Minor 5ss

40.8

-1

58.4

46.2

Minor BPS

42.5

-0.7

2.1

46.87

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023834

Chromosome:

PEDO01004030.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045996

1009 - 8699

7691