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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004034.1_555_1943_R

Intron Information:

Intron Rank:

136507

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

555 - 1943

Intron Length:

1389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTTACTGGG

5'SS Class:

weak_major

3'SS Sequence:

GAGTTACTGGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GAGTTAC

U12 Branch Point Sequence:

CTGGGGGTGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.1

0.17

1.3

52.9

44.5

Major BPS

48.4

-0.1

1.3

41.1

Major PPT

45.7

-0.2

1.8

47.6

44.8

Minor 5ss

35.7

-1.6

3.1

41.9

38.9

Minor BPS

35.2

-1

2.7

53.7

48.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020874

Chromosome:

PEDO01004034.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030796

21 - 2584

2564