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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004065.1_645_1036_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

645 - 1036

Intron Length:

392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTTTTTGGT

5'SS Class:

weak_major

3'SS Sequence:

CCCCAACGAAGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACAAAG

U12 Branch Point Sequence:

TTTGCCCCAACG

Flanking Amino Acid:

MVLKVFWVFLAQLRVFW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.3

0.13

1.3

53.7

43.3

Major BPS

44.8

-0.3

1.4

Major PPT

42.6

-0.4

1.6

38.6

32.2

Minor 5ss

36.5

-1.5

44.8

Minor BPS

53.4

-0

2.1

68.6

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025411

Chromosome:

PEDO01004065.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030121

623 - 2169

1547