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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004068.1_1681_1930_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1681 - 1930

Intron Length:

250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TAAGGAAATACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTCAT

U12 Branch Point Sequence:

TCTACCTCATTT

Flanking Amino Acid:

LVVINTEAEQMKYQQHGINL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.7

29.5

Major BPS

73.5

0.58

73.6

32.5

Major PPT

54.2

0.1

1.1

44.7

Minor 5ss

-1.8

3.1

44.6

43.4

Minor BPS

53.1

0.18

1.9

72.88

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025219

Chromosome:

PEDO01004068.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031864

648 - 2586

1939