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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004068.1_2101_2456_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2101 - 2456

Intron Length:

356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTTTGTTCC

5'SS Class:

weak_major

3'SS Sequence:

TTGTCCAACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

TTGTCCAACACA

Flanking Amino Acid:

HAQLVLVYCVCSSSPTEDSW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.4

0.32

1.2

62.6

36.5

Major BPS

0.28

1.1

63.1

35.8

Major PPT

68.5

0.42

62.7

37.5

Minor 5ss

46.3

-0.4

2.3

59.7

37.7

Minor BPS

47.5

-0.2

2.3

67.91

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025219

Chromosome:

PEDO01004068.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031864

648 - 2586

1939