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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004068.1_2474_2509_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2474 - 2509

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGAAAC

5'SS Class:

major

3'SS Sequence:

GTGAGGCTGCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAAGAAA

U12 Branch Point Sequence:

GTGTAAGAAACT

Flanking Amino Acid:

GKFLGKHAQLVLVYCVCSSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

68.1

37.1

Major BPS

48.4

-0.1

1.4

56.3

37.2

Major PPT

53.1

0.07

1.2

42.9

47.4

Minor 5ss

35.8

-1.6

44.8

42.9

Minor BPS

40.5

-0.6

2.5

62.77

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025219

Chromosome:

PEDO01004068.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031864

648 - 2586

1939