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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004086.1_84684_87179_F

Intron Information:

Intron Rank:

131880

Intron Class:

major

Intron Phase:

Intron Coordinates:

84684 - 87179

Intron Length:

2496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCAAAA

5'SS Class:

major

3'SS Sequence:

CCTTTTTTGACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCAAA

U12 Branch Point Sequence:

CCTTTTTTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.2

38.9

Major BPS

67.7

0.44

1.3

34.1

Major PPT

81.5

0.71

0.9

78.9

33.1

Minor 5ss

37.3

-1.4

3.1

48.9

46.9

Minor BPS

66.3

0.51

1.2

68.82

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020786

Chromosome:

PEDO01004086.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048194

82362 - 87370

5009