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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004094.1_512_1160_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

512 - 1160

Intron Length:

649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCCAA

5'SS Class:

major

3'SS Sequence:

TCGCATCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATAAC

U12 Branch Point Sequence:

TCTCTCGCATCT

Flanking Amino Acid:

CGVLRGALEMVQMAVDVKFV

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

62.9

Major BPS

53.9

0.1

1.2

55.8

37.4

Major PPT

66.4

0.37

0.9

57.9

38.2

Minor 5ss

31.9

-2.1

35.2

42.4

Minor BPS

42.8

-0.4

2.3

64.89

45.6

Associated Gene:

Gene:

TRAPPC3

Ensembl Gene ID:

ENSAPLG00000018836

Chromosome:

PEDO01004094.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040985

392 - 2530

2139