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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004113.1_1312_1605_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1312 - 1605

Intron Length:

294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTAGT

5'SS Class:

strong_major

3'SS Sequence:

ATGTCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGTTTCTGATGT

Flanking Amino Acid:

VYEEVCRDAEALNLPVVGSQ

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.8

38.7

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

0.67

0.9

73.7

36.2

Minor 5ss

30.6

-2.2

44.7

Minor BPS

49.5

0.04

73.14

43.6

Associated Gene:

Gene:

FTCD

Ensembl Gene ID:

ENSAPLG00000015898

Chromosome:

PEDO01004113.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023461

21 - 5646

5626

ENSAPLT00000016598

235 - 6273

6039