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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004113.1_1738_2423_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1738 - 2423

Intron Length:

686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAAGTGG

5'SS Class:

major

3'SS Sequence:

CTGCTCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGACAC

U12 Branch Point Sequence:

TGGGGCTGACAC

Flanking Amino Acid:

ILEEEHKIKLVVSRLGLDSL

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

56.4

43.2

Major BPS

48.1

-0.1

1.2

56.1

39.6

Major PPT

79.3

0.66

0.8

31.8

Minor 5ss

35.6

-1.6

3.3

43.6

Minor BPS

38.3

-0.9

2.1

44.86

43.1

Associated Gene:

Gene:

FTCD

Ensembl Gene ID:

ENSAPLG00000015898

Chromosome:

PEDO01004113.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023461

21 - 5646

5626

ENSAPLT00000016598

235 - 6273

6039