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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004113.1_2486_2921_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2486 - 2921

Intron Length:

436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAGGGGCC

5'SS Class:

weak_major

3'SS Sequence:

CGGTGTGCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

GTGGTCTGACCC

Flanking Amino Acid:

SPFNPQERIIEYLVQAGEED

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.21

1.2

56.9

36.2

Major BPS

63.7

0.34

1.2

41.8

Major PPT

60.9

0.25

52.8

41.7

Minor 5ss

30.4

-2.2

3.7

37.7

41.4

Minor BPS

46.4

-0.2

1.8

55.12

43.2

Associated Gene:

Gene:

FTCD

Ensembl Gene ID:

ENSAPLG00000015898

Chromosome:

PEDO01004113.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023461

21 - 5646

5626

ENSAPLT00000016598

235 - 6273

6039