Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004141.1_155_279_R

Intron Information:

Intron Rank:

136140

Intron Class:

major

Intron Phase:

Intron Coordinates:

155 - 279

Intron Length:

125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

GTATTTTCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

CTCTCTTTACCG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.3

29.7

Major BPS

0.6

65.6

41.1

Major PPT

79.2

0.66

0.9

77.4

36.7

Minor 5ss

37.5

-1.4

2.9

47.5

42.3

Minor BPS

59.2

0.15

1.8

62.23

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020664

Chromosome:

PEDO01004141.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041537

21 - 1438

1418

ENSAPLT00000035688

21 - 1438

1418